BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004H11SP1|AL425301
(991 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig423 1069 0.0
>3x_Contig423
Length = 2127
Score = 1069 bits (539), Expect = 0.0
Identities = 547/549 (99%), Gaps = 1/549 (0%)
Strand = Plus / Plus
Query: 439 acacgcaacacactaactagaaatggaattactaccggaggtcaaaagaacacggtcacc 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acacgcaacacactaactagaaatggaattactaccggaggtcaaaagaacacggtcacc 60
Query: 499 gttgcatacgaagatcaacaacgtatcaatgagttctccaagttgatcatgagaaaagat 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgcatacgaagatcaacaacgtatcaatgagttctccaagttgatcatgagaaaagat 120
Query: 559 gctatcgaacaagatttgacgcaacaaagaacagagaaagagtacctcgacgacgtatcg 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctatcgaacaagatttgacgcaacaaagaacagagaaagagtacctcgacgacgtatcg 180
Query: 619 ttggaaattgaattgatagacgaggatgagaaggtacaatataagatcggagacgtcttc 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggaaattgaattgatagacgaggatgagaaggtacaatataagatcggagacgtcttc 240
Query: 679 gtatttctaaaacagaaagaagtagttgaaaagttagaatccgatgctgaaaacatcgac 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtatttctaaaacagaaagaagtagttgaaaagttagaatccgatgctgaaaacatcgac 300
Query: 739 agcaatatagaaaagctagagagcgatgaggcggaattggactcaagaataaaagagcta 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcaatatagaaaagctagagagcgatgaggcggaattggactcaagaataaaagagcta 360
Query: 799 aagagtatattgtatgccaaattcggtgacaacatcaatttggaacgttgagcccataaa 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagagtatattgtatgccaaattcggtgacaacatcaatttggaacgttgagcccataaa 420
Query: 859 tatacattgctgaagtgcttgatagaa-tgaaaaaatatccttaaaccgagtaatatatg 917
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 421 tatacattgctgaagtgcttgatagaattgaaaaaatatccttaaaccgagtaatatatg 480
Query: 918 tttgcgtataaaatctacatagaaaataatagtwaagaccgacacaacgttgattcagtc 977
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 481 tttgcgtataaaatctacatagaaaataatagtaaagaccgacacaacgttgattcagtc 540
Query: 978 cataatgca 986
|||||||||
Sbjct: 541 cataatgca 549
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8277
Number of Sequences: 1807
Number of extensions: 8277
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 991
length of database: 10,358,551
effective HSP length: 16
effective length of query: 975
effective length of database: 10,329,639
effective search space: 10071398025
effective search space used: 10071398025
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)